celltag_schema

A meta-schema that records connections, types, provenance and evidence for the obs fields in the CZI CxG standard

URI: https://w3id.org/scFAIR/celltag_schema Name: CxG_meta-schema

Classes

Class	Description
AutomatedCellTypeAnnotationMetadata
Container
CxGMetaSchema
FieldRelationship	Relationship between fields
ManualAnnotationMetadata

Slot	Description
algorithm	Name of algorithm
algorithm_reference	DOI, Protocols
author	ORCID of annotator
automated_cell_type_annotation_metadata
evidence_comment	Free text description of supporting evidence for annotation
field_name	The name (key) of an obs field associated with a cell
field_relationship
field_scope
field_type
manual_annotation_metadata
marker_evidence	A list of expressed genes that support this cell type annotation
meta
object	The name of a field used in annotation
reference_data	PURL?
relation
supporting_publication	DOI of supporting publication

Type	Description
Boolean	A binary (true or false) value
Curie	a compact URI
Date	a date (year, month and day) in an idealized calendar
DateOrDatetime	Either a date or a datetime
Datetime	The combination of a date and time
Decimal	A real number with arbitrary precision that conforms to the xsd:decimal speci...
Double	A real number that conforms to the xsd:double specification
Float	A real number that conforms to the xsd:float specification
Integer	An integer
Ncname	Prefix part of CURIE
Nodeidentifier	A URI, CURIE or BNODE that represents a node in a model
Objectidentifier	A URI or CURIE that represents an object in the model
String	A character string
Time	A time object represents a (local) time of day, independent of any particular...
Uri	a complete URI
Uriorcurie	a URI or a CURIE

Subset	Description